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1.
Annals of Laboratory Medicine ; : 128-131, 2015.
Article in English | WPRIM | ID: wpr-64359

ABSTRACT

Translocations leading to fusions between the immunoglobulin heavy chain gene (IGH) and various partner genes have been reported in B-cell precursor acute lymphoblastic leukemia (B-ALL). However, submicroscopic deletions within IGH in B-ALL have not been rigorously assessed. In this study, we investigated characteristics of IGH submicroscopic deletions, by FISH, in B-ALL with IGH rearrangements. FISH was performed by using commercially available IGH dual-color break-apart rearrangement probes (Abbott/Vysis, Downers Grove, IL, USA; Kreatech, Amsterdam, Netherlands). The study group included seven B-ALL patients with IGH rearrangements, observed by FISH. Among them, two exhibited deletion of the 5' variable region of IGH by FISH. The B-ALL in these two patients included two kinds of abnormal cells; one had an IGH rearrangement without any IGH submicroscopic deletion, while the other had an IGH submicroscopic deletion, which showed that one normal fusion signal and one 3' IGH signal were detected. Thus, submicroscopic deletion of the IGH 5' variable region may have occurred in either the native or rearranged chromosome 14. These findings indicate that B-ALL with IGH rearrangements may be accompanied by submicroscopic deletions of the IGH 5' variable region, which can be detected by FISH. The clinical significance of such deletions is unclear, but the loss of part of the IGH gene in B-ALL warrants further study.


Subject(s)
Adult , Child , Female , Humans , Infant , Male , Middle Aged , Young Adult , Gene Deletion , Gene Rearrangement , Immunoglobulin Heavy Chains/genetics , In Situ Hybridization, Fluorescence , Precursor B-Cell Lymphoblastic Leukemia-Lymphoma/genetics
2.
Annals of Laboratory Medicine ; : 220-225, 2015.
Article in English | WPRIM | ID: wpr-29327

ABSTRACT

BACKGROUND: Diffuse interstitial lung diseases (DILDs) form a part of a heterogeneous group of respiratory diseases. Bronchoalveolar lavage (BAL) analysis has been used for differential diagnosis of DILDs, but their clinical usefulness is controversial. The aim of this study was to investigate the clinical usefulness of BAL cellular analysis with lymphocyte subsets for the differential diagnosis of DILDs. METHODS: A total of 69 patients diagnosed with DILDs were enrolled. Basic demographic data, BAL cellular analysis with lymphocyte subsets, histology, and high resolution computed tomogram (HRCT) findings were analyzed and compared as per disease subgroup. RESULTS: Significant differences were found between groups in the proportion of neutrophils (P=0.0178), eosinophils (P=0.0003), T cells (P=0.0305), CD4 cells (P=0.0002), CD8 cells (P<0.0001), and CD4/CD8 ratio (P<0.0001). These findings were characteristic features of eosinophilic pneumonia and sarcoidosis. Other parameters were not significantly different between groups. At the cut-off value of 2.16 for sarcoidosis, CD4/CD8 ratio showed sensitivity of 91.7% (95% CI, 61.5-98.6%) and specificity of 84.2% (95% CI, 72.1-92.5%). CONCLUSIONS: Routine analysis of BAL lymphocyte subset may not provide any additional benefit for differential diagnosis of DILDs, except for conditions where BAL is specifically indicated, such as eosinophilic pneumonia or sarcoidosis.


Subject(s)
Aged , Aged, 80 and over , Female , Humans , Male , Middle Aged , Area Under Curve , Bronchoalveolar Lavage Fluid/cytology , CD4-CD8 Ratio , Demography , Eosinophils/cytology , Immunophenotyping , Lung Diseases, Interstitial/diagnosis , Lymphocyte Subsets/cytology , Neutrophils/cytology , ROC Curve , Sarcoidosis/diagnosis , T-Lymphocytes/cytology , Tomography, X-Ray Computed
3.
Annals of Laboratory Medicine ; : 1-6, 2014.
Article in English | WPRIM | ID: wpr-193136

ABSTRACT

BACKGROUND: Concerns regarding increasing microbial resistance to vancomycin have resulted in recommendations for a higher trough serum vancomycin concentration. This study aimed to assess the dosage guidelines targeting vancomycin trough concentrations of 15-20 mg/L. METHODS: About 216 adult patients (age, >60 yr) were treated with intravenous vancomycin. The patients were divided into 2 groups according to their target vancomycin trough concentrations: the previous guideline group (n=108) treated with targeted vancomycin trough concentrations of 5-15 mg/L from Jan 2009 through April 2011 and the new guideline group (n=108) treated with targeted concentrations of 15-20 mg/L from November 2011 through July 2012. RESULTS: The 2 groups were not significantly different with respect to age, weight, initial serum creatinine, initial creatinine clearance, predictive trough levels, doses, serum drug concentrations, and area under the curve/minimal inhibitory concentrations. Regarding the proportions of vancomycin trough concentrations, the target range was achieved in 50% in the previous guideline group and in 16% in the new guideline group. In the previous and new guideline groups, the trough concentrations of 10-20 mg/dL were observed in 32.4% and 52.8% patients, respectively, and those of <10 mg/L were observed in 45.4% and 29.6%, respectively. CONCLUSIONS: Compared to the previous guideline group, the new guideline group showed higher proportions in the therapeutic range of 10-20 mg/L and lower proportions in trough concentrations <10 mg/L. The strictly managed vancomycin therapeutic drug monitoring in the new guideline group was assessed as more effective.


Subject(s)
Aged , Female , Humans , Male , Middle Aged , Drug Monitoring , Gram-Positive Bacterial Infections/drug therapy , Guidelines as Topic , Half-Life , Injections, Intravenous , Vancomycin/blood
4.
Journal of Laboratory Medicine and Quality Assurance ; : 107-112, 2014.
Article in English | WPRIM | ID: wpr-65812

ABSTRACT

A genomic instability called chromothripsis occurs as a single catastrophic event, generating massive complex genomic rearrangement with a possible characteristic pattern of copy number oscillations. Here, we report a case of secondary plasma cell leukaemia (PCL) showing chromothripsis identified by single nucleotide polymorphism array (SNP-A)-based karyotyping. A 53-year-old male patient was diagnosed as having secondary PCL four years after he was diagnosed with multiple myeloma, and he died four days later due to intracerebral haemorrhage. Chromosomal analysis and fluorescence in situ hybridization (FISH) revealed the deletions of 13q and 17p and an insertion of 1q. Further, genomic aberrations that were not detected by chromosomal analysis and FISH were identified by SNP-A. In particular, SNP-A revealed numerous alternating copy number state switches involving one, two, or three copy number states on chromosome 7q, suggesting the presence of chromothripsis. The present case suggests that chromothripsis may occur in secondary PCL and can be inferred from genomic copy number profiles identified by SNP-A.


Subject(s)
Humans , Male , Middle Aged , Fluorescence , Genomic Instability , In Situ Hybridization , Karyotyping , Multiple Myeloma , Plasma Cells , Polymorphism, Single Nucleotide
5.
Journal of Laboratory Medicine and Quality Assurance ; : 210-215, 2014.
Article in English | WPRIM | ID: wpr-60456

ABSTRACT

Epstein-Barr virus (EBV)-positive T-cell lymphoproliferative disease (EBV+ T-cell LPD) is characterized by a clonal proliferation of T-cells, which may trigger hemophagocytic lymphohistiocytosis (HLH). Chromosomal abnormalities in patients with HLH are usually found in association with underlying malignancies. We report here a case of systemic EBV+ T-cell LPD of childhood initially presenting with HLH. A 19-year-old man was admitted to the hospital with a 2-week history of fever. Laboratory data revealed pancytopenia, hypertriglyceridemia, high ferritin levels, and abnormalities in liver function tests. EBV infection was confirmed by serologic tests and real-time polymerase chain reaction. Examination of the bone marrow showed histiocytic hyperplasia and hemophagocytosis. Further investigation revealed atypical lymphoid cells expressing EBV-encoded RNA, CD3, CD4, and CD8. A chromosomal analysis displayed a complex karyotype. Despite intensive treatment, the patient died 15 days after initial presentation. In conclusion, systemic EBV+ T-cell LPD of childhood presenting with HLH and chromosomal abnormalities may progress rapidly and be fatal. Therefore, a diagnostic workup for chromosomal aberration is essential.


Subject(s)
Humans , Young Adult , Bone Marrow , Chromosome Aberrations , Epstein-Barr Virus Infections , Ferritins , Fever , Herpesvirus 4, Human , Hyperplasia , Hypertriglyceridemia , Karyotype , Liver Function Tests , Lymphocytes , Lymphohistiocytosis, Hemophagocytic , Pancytopenia , Real-Time Polymerase Chain Reaction , RNA , Serologic Tests , T-Lymphocytes
6.
Journal of Laboratory Medicine and Quality Assurance ; : 107-111, 2012.
Article in English | WPRIM | ID: wpr-209295

ABSTRACT

Cases of clonal cytogenetic abnormalities in Philadelphia-negative cells during the treatment of Philadelphia-positive CML have been previously reported. However, clonal abnormalities unrelated to the original t(8;21) or t(15;17) karyotype are not common. Deletion of 20q (del(20q)) is one of the most common recurrent cytogenetic abnormalities in myeloid neoplasms. Here we describe 3 patients with t(8;21), t(15;17), or t(9;22) who developed unrelated del(20q) after successful treatment of leukemia. We retrospectively reviewed the cytogenetic results of 23 AML patients with t(8;21)(q22;q22), 28 AML patients with t(15;17)(q22;q12), and 47 CML patients with t(9;22)(q34;q11.2). We identified 3 patients with del(20q) as the only clonal aberration unrelated to the primary karyotype when they achieved complete morphologic and cytogenetic remission. The latency period between diagnosis and emergence of del(20q) was 1, 114, and 35 months for the 3 patients, respectively. There was no evidence of therapy-related MDS/AML during the follow-up period. In 1 AML patient with t(8;21), relapse occurred in a t(8;21)(q22;q22) clone and the del(20q) clones were lost. The clinical significance of del(20q) as an unrelated clonal aberration is unknown, but our study suggests that del(20q) does not cause therapy-related MDS/AML or indicate disease progression.


Subject(s)
Humans , Chromosome Aberrations , Chromosome Deletion , Chromosomes, Human, Pair 20 , Clone Cells , Cytogenetics , Disease Progression , Follow-Up Studies , Karyotype , Latency Period, Psychological , Leukemia , Recurrence , Retrospective Studies
7.
Laboratory Medicine Online ; : 80-86, 2012.
Article in Korean | WPRIM | ID: wpr-196725

ABSTRACT

BACKGROUND: Plasma cell neoplasm is diagnosed by performing bone marrow examination, serum- and urine-protein electrophoresis, and quantification of free light chains of immunoglobulins. We characterized and quantified monoclonal proteins typical of different diagnosed conditions to determine the best screening test(s). METHODS: We retrospectively reviewed diagnosis of and the characteristics of monoclonal proteins from 113 patients with monoclonal gammopathy. Monoclonal proteins were detected by agarose-gel electrophoresis and capillary electrophoresis, and if the results were ambiguous, they were confirmed by immunofixation electrophoresis. Free light chains were measured using nephelometry. RESULTS: The concentrations of monoclonal proteins in 113 patients with different conditions were as follows: multiple myeloma (MM) (67%), 2.66 (0.87-9.48) g/dL; monoclonal gammopathy of undetermined significance (MGUS) (26%), 0.62 (0.08-2.95) g/dL; lymphoma (3%), 3.65 (1.59-6.54) g/dL; Waldenstrom's macroglobulinemia (2%), 1.99 (1.08-2.90) g/dL; amyloidosis (2%), 0.61 g/dL; and POEMS syndrome (1%), 0.99 g/dL. There was a significant difference in the concentration and kappa/lambda ratio (which was based on the immunetype of the monoclonal proteins) of the monoclonal proteins in patients with MM and MGUS (P<0.001 and P=0.004, respectively). The diagnostic sensitivity of serum-protein electrophoresis, free-light-chain assay, and bone marrow analysis was 87.6%, 84.1%, and 84.5%, respectively. The sensitivity of a combination of 2 or 3 of these tests was higher at 100%. CONCLUSIONS: A combination of protein electrophoresis with immunotyping and serum free-light-chain assay may be the best screening method for detecting monoclonal proteins since its non-invasiveness.


Subject(s)
Humans , Amyloidosis , Bone Marrow , Bone Marrow Examination , Electrophoresis , Electrophoresis, Capillary , Immunoglobulins , Light , Lymphoma , Mass Screening , Monoclonal Gammopathy of Undetermined Significance , Multiple Myeloma , Neoplasms, Plasma Cell , Paraproteinemias , Plasma , Plasma Cells , POEMS Syndrome , Proteins , Retrospective Studies , Waldenstrom Macroglobulinemia
8.
Annals of Laboratory Medicine ; : 445-449, 2012.
Article in English | WPRIM | ID: wpr-162706

ABSTRACT

Prognosis is known to be better in cases with isolated chromosomal abnormalities than in those with complex karyotypes. Accordingly, del(20q) as an isolated abnormality must be distinguished from cases in which it is associated with other chromosomal rearrangements for a better stratification of prognosis. We report a case of an isolated del(20q) abnormality with additional genomic aberrations identified using whole-genome single nucleotide polymorphism array (SNP-A)-based karyotyping. A 39-yr-old man was diagnosed with AML without maturation. Metaphase cytogenetic analysis (MC) revealed del(20)(q11.2) as the isolated abnormality in 100% of metaphase cells analyzed, and FISH analysis using D20S108 confirmed the 20q deletion in 99% of interphase cells. Using FISH, other rearrangements such as BCR/ABL1, RUNX1/RUNX1T1, PML/RARA, CBFB/MYH11, and MLL were found to be negative. SNP-A identified an additional copy neutral loss of heterozygosity (CN-LOH) in the 11q13.1-q25 region. Furthermore, SNP-A allowed for a more precise definition of the breakpoints of the 20q deletion (20q11.22-q13.31). Unexpectedly, the terminal regions showed gain on chromosome 20q. The patient did not achieve complete remission; 8 months later, he died from complications of leukemic cell infiltrations into the central nervous system. This study suggests that a presumably isolated chromosomal abnormality by MC may have additional genomic aberrations, including CN-LOH, which could be associated with a poor prognosis. SNP-A-based karyotyping may be helpful for distinguishing true isolated cases from cases in combination with additional genomic aberrations not detected by MC.

9.
The Ewha Medical Journal ; : 62-64, 2012.
Article in English | WPRIM | ID: wpr-107396

ABSTRACT

Trisomy 22 is closely associated with inv(16) or t(16;16) and could be a marker of cryptic rearrangement of CBFB/MYH11 in acute myeloid leukemia (AML). Trisomy 22 not associated with CBFB/MYH11 rearrangement is a rare event. Here, we report a case diagnosed as refractory anemia with excess blasts-2 (RAEB-2) with sole trisomy 22 in the absence of CBFB/MYH11 rearrangement. The cytogenetic study of bone marrow cells disclosed trisomy 22 in 10% of metaphase cells analyzed. The other chromosomal abnormalities were not found. Fluorescence in situ hybridization (FISH) using CBFB/MYH11 probe to detect cryptic inv(16)(p13q22) showed negative result. We also excluded rearrangements of chromosome 5, 7, 8, 20, and ETV6 by FISH. Sole trisomy 22 not associated with inv(16) is a true entity.


Subject(s)
Anemia, Refractory , Bone Marrow Cells , Chromosome Aberrations , Chromosomes, Human, Pair 22 , Chromosomes, Human, Pair 5 , Cytogenetics , Fluorescence , In Situ Hybridization , Leukemia, Myeloid, Acute , Metaphase , Myelodysplastic Syndromes , Trisomy
10.
Annals of Laboratory Medicine ; : 307-311, 2012.
Article in English | WPRIM | ID: wpr-47745

ABSTRACT

Chromosomes forming a corresponding ring cannot be clearly defined by conventional cytogenetics or FISH. Karyotypic analyses using whole-genome single nucleotide polymorphism arrays (SNP-A) may result in the identification of previously cryptic lesions and allow for more precise definition of breakpoints. We describe a case of AML with metaphase cells bearing -5, del(11)(q22), and +r. With SNP-A, a 5p-terminal deletion (11 megabases [Mb]), a 5q-terminal deletion (27 Mb), an 11q-interstitial deletion (29 Mb), and a 21q gain (3 Mb) were identified. Therefore, the G-banded karyotype was revised as 46, XY, r(5)(p15. 2q33.2), del(11)(q14.1q23.2), dup(21)(q22.13q22.2)[18]/46,XY[2]. SNP-A could be a powerful tool for characterizing ring chromosomes in which the involved chromosomes or bands cannot be precisely identified by conventional cytogenetics or FISH.


Subject(s)
Humans , Male , Middle Aged , Chromosome Deletion , Chromosomes, Human, Pair 5 , In Situ Hybridization, Fluorescence , Karyotyping , Leukemia, Myeloid, Acute/diagnosis , Metaphase , Oligonucleotide Array Sequence Analysis , Polymorphism, Single Nucleotide , Ring Chromosomes
11.
Korean Journal of Hematology ; : 171-176, 2010.
Article in English | WPRIM | ID: wpr-720396

ABSTRACT

BACKGROUND: Fluorescence in situ hybridization (FISH) analysis can provide important information in the management of patients with hematologic malignancies. However, FISH performed in addition to G-banded karyotype can be labor-intensive and expensive. The aim of this study was to evaluate whether FISH gives additional information in the setting of adequate conventional cytogenetics in cases of hematologic malignancies. METHODS: Bone marrow aspirates were obtained from 135 patients at diagnosis (56 AML, 32 MDS, 20 ALL, and 27 MM) between 2005 and 2010. Interphase FISH was performed using the following probes: BCR/ABL1, AML1/ETO, PML/RARA, CBFB, MLL, EGR1, CEP8, and D7S486 for AML; CEP8, D20S108, EGR1, and D7S486 for MDS; BCR/ABL1, MLL, CDKN2A (p16), ETV6, and 6q21/c-myc for ALL; IgH, TP53, D13S25, IgH/CCND1, IgH/MAF, IgH/FGFR3, and 1q21/8p21 for MM. We compared the results of FISH with the corresponding aberrations identified by G-banded karyotype. RESULTS: Additional genetic aberrations detected by FISH (which were not identified by G-banded karyotype) were 4%, 9%, 50%, and 67% in AML, MDS, ALL, and MM, respectively. In ALL, CDKN2A and ETV6 FISH revealed additional genetic aberrations in 33% and 28% of cases, respectively. In MM, FISH was of benefit in detecting IgH, D13S25, TP53, and 1q21 rearrangements, not detected by G-banded karyotype (31%, 36%, 20%, and 40%, respectively). CONCLUSION: These results suggest that performing FISH in addition to G-banded karyotype may contribute little additional genetic information in AML and MDS, whereas routine FISH analysis appears to be an efficient screening method in ALL and MM.


Subject(s)
Humans , Bone Marrow , Cytogenetics , Fluorescence , Hematologic Neoplasms , In Situ Hybridization , Interphase , Karyotype , Leukemia, Myeloid, Acute , Mass Screening , Multiple Myeloma , Myelodysplastic Syndromes , Precursor Cell Lymphoblastic Leukemia-Lymphoma
12.
The Korean Journal of Laboratory Medicine ; : 97-104, 2010.
Article in English | WPRIM | ID: wpr-151635

ABSTRACT

BACKGROUND: Despite the diagnostic utility of immunophenotyping for myelodysplastic syndromes (MDS), it has not been widely performed, and reports on this are absent in Korea. We aimed to evaluate the immunophenotypic features of non-blastic granulocytes, monocytes, and blasts in patients with MDS and non-clonal disorders using routine flow cytometry (FCM). Moreover, we evaluated the phenotypic abnormalities of mature cells in leukemic patients. METHODS: Marrow aspirates from 60 patients, including 18 with MDS, 18 with leukemia, and 24 with non-clonal disorders (control group), were analyzed using FCM. Blasts, non-blast myeloid cells, and monocytes were gated based on CD45 expression and side scatter (SSC). The phenotypes were then compared among the 3 groups. RESULTS: Compared to non-clonal disorders, the granulocytic lineages of MDS showed decreased SSC (P=0.005), increased CD45 intensity (P=0.020), decreased CD10-positive granulocytes (P= 0.030), and a higher CD56-positive rate (P=0.005). It is noteworthy that similar results were obtained in the leukemia group, and these findings were not related to the phenotypes of the leukemic cells. Using blast and monocytic gating, useful parameters for generating a differential diagnosis were not found. CONCLUSIONS: Gating the granulocytic region is a relatively easy method for MDS immunophenotyping. Among the parameters studied, SSC, CD10, and CD56 were the most useful for differentiating MDS from non-clonal disorders. While immunophenotypic changes in MDS appear to be useful for differentiating MDS from non-clonal disorders, these changes were also noted in the mature cells of leukemic patients.


Subject(s)
Adolescent , Adult , Aged , Aged, 80 and over , Child , Child, Preschool , Female , Humans , Male , Middle Aged , Leukocyte Common Antigens/metabolism , CD56 Antigen/metabolism , Bone Marrow Cells/cytology , Cell Lineage , Diagnosis, Differential , Flow Cytometry , Granulocytes/classification , Immunophenotyping , Leukemia/diagnosis , Monocytes/classification , Myelodysplastic Syndromes/diagnosis , Neprilysin/metabolism , Phenotype
13.
The Korean Journal of Laboratory Medicine ; : 105-110, 2010.
Article in Korean | WPRIM | ID: wpr-151634

ABSTRACT

BACKGROUND: In patients with isolated thrombocytopenia, but without significant dysplasia, diagnosis of idiopathic thrombocytopenic purpura (ITP) rather than myelodysplastic syndrome (MDS) may be taken into account. It is important to make an accurate diagnosis because different treatments are used for ITP and MDS. The purpose of this study was to investigate the clinical and hematologic features of patients who were initially diagnosed as ITP but had cytogenetic abnormalities. METHODS: We retrospectively reviewed cytogenetic studies of 100 patients who were diagnosed as ITP from 2004 to 2009 at Mokdong Hospital of Ewha Womans University based on clinical features and hematologic studies. Bone marrow pathology was re-evaluated based on 2008 WHO classification. Cytogenetic analysis was performed by 24-48 hr culture of bone marrow aspirates without using mitogens and 20 metaphases were analyzed. RESULTS: Of the 100 patients diagnosed as ITP initially, three patients (3%) had cytogenetic abnormalities. They had no thrombocytopenia-related symptoms and thrombocytopenia was found accidentally. The numbers of megakaryocytes in bone marrow were increased and dysplasia was not found in megakaryocyte, erythroid, and myeloid cell lineages. The proportion of blasts was within normal limits. Clonal chromosomal abnormalities found were der(1;7)(q10;p10), add(9)(q12), or t(7;11)(p22;q12). Presumptive diagnosis of MDS or diagnosis of idiopathic cytopenia of undetermined significance (ICUS) was made according to 2008 WHO classification. During the follow up, disease progression was not found. CONCLUSIONS: In patients with suspected ITP, cytogenetic analysis should be done. If specific clonal chromosomal abnormality is found, presumptive diagnosis of MDS has to be considered and close follow up is needed.


Subject(s)
Adult , Female , Humans , Male , Middle Aged , Bone Marrow Cells/cytology , Cell Lineage , Chromosome Aberrations , Diagnosis, Differential , Megakaryocytes/immunology , Myelodysplastic Syndromes/diagnosis , Purpura, Thrombocytopenic, Idiopathic/diagnosis , Retrospective Studies
14.
Korean Journal of Clinical Microbiology ; : 40-46, 2010.
Article in Korean | WPRIM | ID: wpr-87113

ABSTRACT

BACKGROUND: Community-acquired pneumonia (CAP) is a major infectious disease with significant morbidity and mortality worldwide. Streptococcus pneumoniae, Haemophilus influenzae, Mycoplasma pneumoniae, Chlamydophila pneumoniae, Legionella pneumophila, and Bordetella pertussis are common pathogens of CAP; however, the conventional methods used to detect these agents, including culturing, lack sensitivity and are time-consuming. We evaluated a recently developed multiplex PCR assay which can test these agents simultaneously. METHODS: One hundred patients with pneumonia and 99 healthy adults were tested using the Seeplex Pneumobacter ACE Detection assay (Seegene, Inc., Seoul, Korea). Culture and urinary antigen tests were also performed. RESULTS: In patients with pneumonia, the positive detection rates of PCR for S. pneumoniae and H. influenzae were 52.0% (52/100) and 30.0% (30/100), respectively, those of M. pneumoniae and L. pneumophila were 2.0% (2/100) and 1.0% (1/100), respectively, and B. pertussis and C. pneumoniae were not detected. In healthy adults, the detection rates of S. pneumoniae and H. influenzae revealed similar results, 53.5% (53/101) and 40.4% (40/101), respectively, and the other four pathogens were not detected. The sensitivity and specificity of PCR for S. pneumoniae in pneumonia patients were 100% (95% confidence interval [CI], 87.9~100%) and 65.7% (95% CI, 55.2~76.5%), respectively, according to the urinary antigen test and cultures of the respiratory samples and blood. CONCLUSION: Differentiating S. pneumoniae and H. influenzae colonization from infection was difficult using the PCR assay. Therefore, the use of this assay is inappropriate for the diagnosis of pneumonia due to these agents, although multiplex PCR assay would be useful for the detection of M. pneumoniae and L. pneumophila.


Subject(s)
Adult , Humans , Bordetella pertussis , Chlamydial Pneumonia , Chlamydophila pneumoniae , Colon , Communicable Diseases , Haemophilus influenzae , Influenza, Human , Legionella pneumophila , Multiplex Polymerase Chain Reaction , Mycoplasma pneumoniae , Pneumonia , Pneumonia, Mycoplasma , Polymerase Chain Reaction , Sensitivity and Specificity , Streptococcus pneumoniae , Whooping Cough
15.
The Korean Journal of Laboratory Medicine ; : 711-717, 2010.
Article in Korean | WPRIM | ID: wpr-73296

ABSTRACT

A variant Philadelphia chromosome (Ph) is generated from translocation of one or more partner chromosomes in addition to chromosomes 9 and 22. We have described the cases of 2 patients bearing variant Ph detected by interphase FISH but not detected by G-banded karyotyping and metaphase FISH. FISH was performed using BCR/ABL dual color dual fusion translocation probes (Abbott Molecular, USA). A 52-year-old man was diagnosed with acute leukemia of mixed phenotype. G-banded karyotyping showed 46,XY,t(9;22)(q34;q11.2)[12]/47,idem,+der(22)t(9;22)[5]/46,XY[3]. Interphase FISH revealed nuc ish(ABL1,BCR)x3(ABL1 con BCRx2)[329/450]/(ABL1,BCR)x4(ABL1 con BCRx3)[5/450]/(AL1,BCR)x3(ABL1 con BCRx1)[44/450]. Metaphase FISH showed ish (9;22)(ABL1+,BCR1+;BCR+,ABL+)[22]/der(22)(BCR+,ABL1+)[3]. The other case was that of a 31-yr-old male patient diagnosed with CML in the blastic phase. G-banded karyotyping of all 20 metaphase cells showed 47,XYYc,dup(1)(q21q32),del(7)(p11.2),t(9;22)(q34;q11.2). Interphase FISH revealed nuc ish(ABL1,BCR)x3(ABL1 con BCRx2)[254/600]/(ABL1,BCR)x3(ABL1 con BCRx1)[191/600]. Metaphase FISH showed ish t(9;22)(ABL1+,BCR+;BCR+,ABL1+)[16]. These results suggest that typical t(9;22) and variant Ph may coexist in the same patient, and interphase FISH may facilitate the detection of the variant Ph that cannot be detected by G-banded karyotyping alone.


Subject(s)
Adult , Humans , Male , Middle Aged , Chromosomes, Human, Pair 22 , Chromosomes, Human, Pair 9 , In Situ Hybridization, Fluorescence/methods , Interphase , Karyotyping , Leukemia/diagnosis , Leukemia, Myelogenous, Chronic, BCR-ABL Positive/diagnosis , Metaphase , Phenotype , Philadelphia Chromosome , Translocation, Genetic
16.
The Korean Journal of Laboratory Medicine ; : 536-540, 2009.
Article in English | WPRIM | ID: wpr-106762

ABSTRACT

Hemoglobin (Hb) Yamagata is a rare Hb variant, which has been reported only twice-one case each in Japan and Korea. This variant arises from a Lys --> Asn substitution due to a mutation of AAA to AAC or AAT at codon 133 of the beta-globin gene. This study reports the third case of a patient detected with Hb Yamagata [HBB: c.399A>T; p.Lys133Asn] and discusses the effect of this variant on HbA1c measurement. This variant was detected in a 70-yr-old Korean man with diabetes mellitus during a routine follow-up. The HbA1c concentration determined using Variant ll Turbo (Bio-Rad, USA) was abnormally high at 47.9%. It was impossible to measure the HbA1c level accurately using Variant ll Thalassemia Mode (Bio-Rad, USA). However, the HbA1c levels analyzed by HLC-723 G7 (Tosoh, Japan), Cobas Integra (Roche, Switzerland) and NycoCard (Axis-Shield, Norway) were 5.0%, 8.0%, and 7.9%, respectively. This study shows that Hb Yamagata interferes with the accurate measurement of HbA1c levels in a diabetic patient. Taking these findings into consideration, we think that an immunoassay or affinity chromatography can be used as an alternate method for measuring the HbA1c level in a patient with this variant. In conclusion, a patient can be inferred to have an Hb variant if the HbA1c concentration is abnormally high or low or if there is a discrepancy between the results obtained using different methods, and if the clinical status of the patient suggests the presence of abnormal Hb. Subsequently, the HbA1c values can be determined by methods based on different principles.


Subject(s)
Aged , Humans , Male , Amino Acid Substitution , Diabetes Mellitus/diagnosis , Electrophoresis, Capillary , Glycated Hemoglobin/analysis , Hemoglobins, Abnormal/analysis , Reagent Kits, Diagnostic , Sequence Analysis, DNA , beta-Globins/genetics
17.
Journal of Laboratory Medicine and Quality Assurance ; : 209-215, 2008.
Article in Korean | WPRIM | ID: wpr-130592

ABSTRACT

BACKGROUND: The automated urine cell analyzer UF-100 (Syxmex co., Japan), flow cytometer-based instrument, has enabled to perform rapid and efficient work. We evaluated the UF-100 by comparing performance in urine sediment testing with counting chamber, standardized method, and traditional manual microscopy widely used in laboratories, and established reference ranges in our hospital. METHODS: Urine samples were obtained from patients in their 20s to 60s who visited hospital for regular check-up between March and April 2007 at Ewha Womans University Mokdong Hospital. We selected randomly a total of 261 samples (male 130, female 131) and evaluated correlations of red blood cell (RBC) and white blood cell (WBC) counts of UF-100 with counting chamber, and manual microscopy. Moreover, we established reference ranges of UF-100 and counting chamber according to CLSI guideline, using 156 urine samples (male 93, female 63) with normal dipstick (strip) test results. RESULTS: The RBC correlation coefficients between UF-100 and counting chamber, UF-100 and manual microscopy, counting chamber and manual microscopy were 0.538, 0.873, and 0.619, respectively. The WBC correlation coefficients between UF-100 and counting chamber, UF-100 and manual microscopy, counting chamber and manual microscopy were 0.992, 0.902, and 0.893, respectively and showed good correlations. The results of UF-100 were higher than counting chamber and manual microscopy. The RBC reference ranges of UF-100 nd counting chamber were 0.5-24.9/microliter (male 0.4-12.2/microliter, female 0.9-38.8/microliter) and 0-4/microliter (male 0-4/microliter, female 0-5/microliter), and the WBC reference ranges of those were 0.9-21.8/microliter (male 0.8-12.6/microliter, female 2.0-23.4/microliter) and 0-7/microliter (male 0-7/microliter, female 0-9/microliter). CONCLUSIONS: The fully automated analyzer UF-100 could be useful to enhance efficiency by labor-saving, turnaround time reduction and improving throughput and to enable standardization. But it is needed for further study including clinical evaluation, because the results and reference ranges between UF-100 and counting chamber or manual microscopy showed considerable differences.


Subject(s)
Female , Humans , Erythrocytes , Leukocytes , Microscopy , Reference Values
18.
Journal of Laboratory Medicine and Quality Assurance ; : 209-215, 2008.
Article in Korean | WPRIM | ID: wpr-130585

ABSTRACT

BACKGROUND: The automated urine cell analyzer UF-100 (Syxmex co., Japan), flow cytometer-based instrument, has enabled to perform rapid and efficient work. We evaluated the UF-100 by comparing performance in urine sediment testing with counting chamber, standardized method, and traditional manual microscopy widely used in laboratories, and established reference ranges in our hospital. METHODS: Urine samples were obtained from patients in their 20s to 60s who visited hospital for regular check-up between March and April 2007 at Ewha Womans University Mokdong Hospital. We selected randomly a total of 261 samples (male 130, female 131) and evaluated correlations of red blood cell (RBC) and white blood cell (WBC) counts of UF-100 with counting chamber, and manual microscopy. Moreover, we established reference ranges of UF-100 and counting chamber according to CLSI guideline, using 156 urine samples (male 93, female 63) with normal dipstick (strip) test results. RESULTS: The RBC correlation coefficients between UF-100 and counting chamber, UF-100 and manual microscopy, counting chamber and manual microscopy were 0.538, 0.873, and 0.619, respectively. The WBC correlation coefficients between UF-100 and counting chamber, UF-100 and manual microscopy, counting chamber and manual microscopy were 0.992, 0.902, and 0.893, respectively and showed good correlations. The results of UF-100 were higher than counting chamber and manual microscopy. The RBC reference ranges of UF-100 nd counting chamber were 0.5-24.9/microliter (male 0.4-12.2/microliter, female 0.9-38.8/microliter) and 0-4/microliter (male 0-4/microliter, female 0-5/microliter), and the WBC reference ranges of those were 0.9-21.8/microliter (male 0.8-12.6/microliter, female 2.0-23.4/microliter) and 0-7/microliter (male 0-7/microliter, female 0-9/microliter). CONCLUSIONS: The fully automated analyzer UF-100 could be useful to enhance efficiency by labor-saving, turnaround time reduction and improving throughput and to enable standardization. But it is needed for further study including clinical evaluation, because the results and reference ranges between UF-100 and counting chamber or manual microscopy showed considerable differences.


Subject(s)
Female , Humans , Erythrocytes , Leukocytes , Microscopy , Reference Values
19.
The Korean Journal of Laboratory Medicine ; : 253-256, 2007.
Article in English | WPRIM | ID: wpr-7856

ABSTRACT

The differential diagnosis of acute lymphoblastic leukemia (ALL) from other small round blue cell tumors in children is very important for proper treatment, but sometimes difficult. CD45 is expressed on almost all-human leukocytes and not expressed on other small round blue cell tumors. Moreover, CD19 is expressed on all stages of B lineage cells and loss of this antigen is very rare in precursor B-cell ALL. We report a case of ALL with atypical morphology and immunophenotype. A 6-yr-old girl presented with fever and weight loss. Many abnormal cells with variable sized, high nuclearcytoplasmic ratio and distinct nucleoli were counted 23% in bone marrow. The results of immunophenotyping were negative for CD45, CD19, CD10, CD20, CD3, CD5, CD7, CD56/16, CD13, and CD33 and positive for CD22, TdT, and CD34. The immunohistochemical staining of bone marrow biopsies was positive for CD79a, CD10, TdT and CD99. The cytogenetic study showed normal karyotype but amplification of MLL (myeloid/lymphoid or mixed lineage leukemia) gene was suggestive in the fluorescent in situ hybridization. The patient received the standard chemotherapy for acute lymphoblastic leukemia and reached complete remission.


Subject(s)
Child , Female , Humans , Acute Disease , Antigens, CD19/analysis , Leukocyte Common Antigens/analysis , Bone Marrow/pathology , In Situ Hybridization , Precursor B-Cell Lymphoblastic Leukemia-Lymphoma/diagnosis
20.
The Korean Journal of Laboratory Medicine ; : 313-317, 2007.
Article in English | WPRIM | ID: wpr-22154

ABSTRACT

BACKGROUND: HLA-DR negativity is known to be useful for distinguishing acute promyelocytic leukemia (APL) from other subtypes of AML, but non-APL cases without HLA-DR antigen expression have been reported. The purpose of this study was to evaluate and compare the characteristics of APL, HLA-DR negative non-APL, and HLA-DR positive non-APL cases. METHODS: A total of 114 cases of AML admitted at Ewha Womans University, Mokdong Hospital between March 1997 and June 2006 were included in this study. A diagnosis of AML was made based on the results of morphology, cytochemistry, immunophenotype, cytogenetics, and/or fluorescence in situ hybridization. RESULTS: Among the 114 AML patients, HLA-DR antigen was not expressed in 39 (34%), including 24 non-APL (62%) and 15 APL patients (38%). The HLA-DR negative non-APL group showed higher leukocyte counts and positive rate of CD19 expression than did APL group (P<0.05). The remaining laboratory findings were not statistically different between the HLA-DR negative non-APL and APL groups. CD34 expression was more frequent in the HLA-DR positive non-APL group than in the HLA-DR negative non-APL group and APL group. Of the 24 patients with HLA-DR negative non-APL, 7 patients had disseminated intravascular coagulation and 2 patients showed morphologic features similar to those of APL. CONCLUSIONS: CD19 expression and leukocyte count may be helpful for differentiating HLA-DR negative non-APL from APL. However, the final diagnosis and classification should be confirmed by cytogenetic or molecular studies.


Subject(s)
Adolescent , Adult , Aged , Aged, 80 and over , Child , Child, Preschool , Female , Humans , Male , Middle Aged , Antigens, CD19/metabolism , Antigens, CD34/metabolism , HLA-DR Antigens/metabolism , Immunophenotyping , Leukemia, Myeloid, Acute/diagnosis , Leukocyte Count , Retrospective Studies
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